Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVDNIIMPLVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFIIIAFAIFIFVKVLTSFIKKKEQTVEETPVPPTEEYLKEIRDLLKEQQK
3H0R Chain:B ((351-382))
--------------------------------------------------------------------------------------------LLGLLRDKGISIEESPVKP--EHLAELVKLIKEK--
General information:
TITO was launched using:
RESULT:
Template:
3H0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3652 for 144 contacts (-25.4/contact) +
2D Compatibility (PS) -3265 + (NN) -2014 + (LL) 9096
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -3685.0 ( -25.59 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3H0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0R-query.scw
PDB file :
Tito_Scwrl_3H0R.pdb
: