Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSISIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMRQRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQARNDLITNVSHDLRTPLTSI-LGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLFSYTRLDSVDYQLKKDELDIVELLRQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQIMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYKVD--KNRTTTGTGLGLAIAKSIVEKHGGIVTAE-SKKRQTSFIVKLPLI |
| 4BIW Chain:A ((83-294)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISHELRTPLTRLQLGTALLRRRSGESKELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYS--HTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95802 for 1516 contacts (-63.2/contact) +
2D Compatibility (PS) -21883 + (NN) -3884 + (LL) 17732
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -118537.0 ( -78.19 by residue)
QMean score : 0.504
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