Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFTYNREHVGDTLMVIVKDSQGAKLDVDRRGQVARVYLQDSKETVAWNIFEVSSLIVIEGAGQITLSDQDIKILNAELLKEGFEDSLVNNIEPT---FVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLKTVAALPGAMMPN-GSLIFPGKLRGEDSFGMLCSARELALPNAPQVRGIIELSDQVIVGESFDANKHWKN
1B70 Chain:B ((19-125))
------------------------------------------------------------------------EVLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPGT---RLKRLVLDAGRTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALSPRELGVGEYGGGLLEFPEDALPPGTPLSEAWPEEVV
General information:
TITO was launched using:
RESULT:
Template:
1B70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52853 for 644 contacts (-82.1/contact) +
2D Compatibility (PS) -11887 + (NN) -10240 + (LL) 5944
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -76336.0 ( -118.53 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_1B70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B70-query.scw
PDB file :
Tito_Scwrl_1B70.pdb
: