Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKECRDFYRQIQHTYNDIAVREDAVLSSILLSASNGLIKTSDVPRVAYELTQQLENNEIEKSFESLATVKELKKSAKKLSERYEQNKVTTGLLSKVFGNH
2KVS Chain:A ((1-80))
MAGDPMTFYNFIMGFQND---------NTPFGILAEHVSEDKAFPR------LEERHQVIRAYVMSNYTDHQLIETTNRAISLYMANLEHHH------HHH
General information:
TITO was launched using:
RESULT:
Template:
2KVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15025 for 464 contacts (32.4/contact) +
2D Compatibility (PS) -8306 + (NN) -3400 + (LL) 2652
1D Compatibility (HY) -400 + (ID) 750
Total energy: 4821.0 ( 10.39 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_2KVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVS-query.scw
PDB file :
Tito_Scwrl_2KVS.pdb
: