Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLEIAKVYLQGLGLASITVILVGIIWVFWRAKKNIDKTARERQSVLYDVLLIALMTAPILAFAFVAIILMIKA
2AP2 Chain:Q ((1-14))
------------------------------VVQEALDKAREGRT------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1512 for 46 contacts (32.9/contact) +
2D Compatibility (PS) -1466 + (NN) 195 + (LL) 7788
1D Compatibility (HY) -400 + (ID) 150
Total energy: 7479.0 ( 162.59 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2AP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AP2-query.scw
PDB file :
Tito_Scwrl_2AP2.pdb
: