Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAYSNIALNKSLKKSRLSDKDRALVTEIVYGTVARKITLEWYLSHFIVDRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNKKGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLFERNKASLRVTDLSQKQTIKETLNVRDSHIAETALVADSGNFASTSFFQDGLITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYLTTGAVTALDLYD------HKLELVMEN--AKRLGLSDKIKTKKLDASKAHEYFLE-DTFDKILVDAPCSG--IGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGIITYSTCTIFEEENFQVIEKFLENHPNFEQVELSHTQEDIVKRGCISISPEQYHTDGFFIGQVKRIL |
| 4FZV Chain:A ((132-301)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMDAASLLPVLALGLQPGDIVLDLCAAPGGKT---LALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE--LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49308 for 1174 contacts (-42.0/contact) +
2D Compatibility (PS) -16647 + (NN) -7293 + (LL) 19384
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -65464.0 ( -55.76 by residue)
QMean score : 0.402
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