Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIQEIKDLMTQFDESSLREFSFKTSDGELSFSKNEGKAPLVPTMSPMSHQPEATPTIATPVSNEAGEQTKQATEVVSEIPESTVTVAEGDVVESPLVGVAYLASGPDKPNFVSVGDSVKKGQTLMIIEAMKVMNEVPAPHDGVVTEILVANEEVIEFGKGLVRIK
4QSH Chain:A ((1093-1145))
----------------------------------------------------------------------------------------------------------------VKKGDSVKKGDPLLITEAMKMETTIQAPFDGEVSSIYVSDGDTIESGDLLIEVN
General information:
TITO was launched using:
RESULT:
Template:
4QSH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34882 for 280 contacts (-124.6/contact) +
2D Compatibility (PS) -5504 + (NN) 2968 + (LL) 6036
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -36632.0 ( -130.83 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_4QSH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QSH-query.scw
PDB file :
Tito_Scwrl_4QSH.pdb
: