Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTETIYKLILKDGLRQIKFKNSHLKLVSSAEEGKRGAIFAYRSKANMIKARGLVLTSMEAVSENQDSFTHWTPNVYRYGSYSDSKRQITRGHSEDNLRQVNTFYIDFDITSSAEEMTSGDILTAAIDLGFMPTLILKSDKGYQAYFVLSEPAYVTSHSQFRVVKVAKAISQNLRNYFSQTLPVDMTCNHFGIARMPRTDNIEFFHADYTYSFQEWLDWSMKQSDIPFPSKKPNLTVISGSEGVKQVDEPWYGLLMREANIKGDKALMGRNNVLFTLALANFSSGVSQSDCEVVLADFNEHLAEPLSQDEFLKVIYSAYSGKYEAANRDYIKLLCKAWVNENLRNSDLFIKQRWYKFKKNRANRKNSHLHEWKADVMAYLEGYFQSDDPFIQTTKKAIREELNIPERSLDKVLKALKADNKIFFAVKSGRGGGIRLTSVKAIVLSLIQVKKERQEAYFANVAAFFEESLGFIKRVIEGVKSGLKQAKQLSLFEADIG |
2LNB Chain:A ((21-66)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQRILQVLTEA---GS---PVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTSPATWCLGGTDPE----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15476 for 266 contacts (-58.2/contact) +
2D Compatibility (PS) -5226 + (NN) -4417 + (LL) 30320
1D Compatibility (HY) -3600 + (ID) 450
Total energy: 1151.0 ( 4.33 by residue)
QMean score : 0.680
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