Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLGKLPDGIFTLLRFNDEGGQLTHISESEALWLTLELAPEKMDCI
1R0V Chain:A ((176-190))
---------------------GDLVTLSLIESLYLL-----------
General information:
TITO was launched using:
RESULT:
Template:
1R0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2233 for 47 contacts (-47.5/contact) +
2D Compatibility (PS) -1746 + (NN) -756 + (LL) 2216
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -4819.0 ( -102.53 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_1R0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R0V-query.scw
PDB file :
Tito_Scwrl_1R0V.pdb
: