Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVHVIAAEGHLFEYGLPKDNWDLDKLPLVDVSFKQTLKQDKVSKEIFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEGKNKVTKRLWVNSLTTRALQKAFQNLRE-PIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKGKGNSLSVGRVQTPGVRLICENDLAIQNFRPETYWK------------LQLQ-DKETEISFS--NKEKYSDSELILAQARQLKAISIVSSVEMEEK----QRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLYLKKYLSYPRTDTRFITEEEFDYLKNYLKSYQEVINCSFEAVNLEPRENYVNPEKVAKTSHYALIPTE-NI--PNLVTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQGLVFKTTGRQMFDPGWAAFSQQKLKGDIE-LPDYRVGDQIE-TKVIIVEGMTKPPKRITESQLISDILPKYGLGTQATRATMLQTIQDRGYITKDKKTGQLFPTNKAYLLIHYLYDNEFASPETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD |
| 1CY4 Chain:A ((92-512)) | -----------------------------------------------------------------------------------EKVVSELKQLAEKADHIYLATDLDREGEAIAWH-LREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVN---AQQARRFMDRVVGYMVSPL----------LWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKAR-------YSVLEREDKPTTSKPGAP--FITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGY-------ISDNFGKKYLPESPNQYA--------HEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPAL------ILPAVNKGDALTLVELTPAQHFTKPPARFSEASLVKE-LEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60350 for 2682 contacts (-22.5/contact) +
2D Compatibility (PS) -41006 + (NN) -10092 + (LL) 10288
1D Compatibility (HY) -24000 + (ID) 6250
Total energy: -131410.0 ( -49.00 by residue)
QMean score : 0.411
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