Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK
3QOQ Chain:A ((16-61))
------------------------------------SRTADKFVVRLPEGMR-EQIAEVARSHHR-SMNSEIIARLEQSLLQEGA-------
General information:
TITO was launched using:
RESULT:
Template:
3QOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9154 for 199 contacts (-46.0/contact) +
2D Compatibility (PS) -5073 + (NN) -2469 + (LL) 2528
1D Compatibility (HY) -800 + (ID) 250
Total energy: -15218.0 ( -76.47 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3QOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QOQ-query.scw
PDB file :
Tito_Scwrl_3QOQ.pdb
: