Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPSFKKLLLLFSIITILSIACTPHAKASGRSWKSWFIEQYFWLKRDKSYYKVQDESSFQKYLNASREQSDKGYYLDPNSVNGGLVQERLFDMQVYSWNDNGKANQKTIFYLAGGSYLNNPTPYHISMLKTLSTSLDAKIILPIYPKTPRYTYDYAIPRLVNLYRHFHE---KNANLTLMGDSAGGGLALGLAHALSHQSGQEAIPQPKNIILLSPWLDVTMKHPEIPKYEDTDPILSAWGLARVGEIWANGSNNTNHTYVSPKNAPATKLAPITLFTGTREIFFPDIRDYAAQLQAANHPVNYIAQEGMNHV----YPIYPIEEAKTAQYQMIDIINKTP |
3L1I Chain:A ((63-283)) | -----------------------------------------------------------------------------------------------------GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVL----AVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPM---GGINKMAARYLNGA-DAKHPYASPNFANLKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLP--EGKQAIVRVGEFMREQW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96632 for 1834 contacts (-52.7/contact) +
2D Compatibility (PS) -22070 + (NN) -9001 + (LL) 7364
1D Compatibility (HY) -9200 + (ID) 3250
Total energy: -132789.0 ( -72.40 by residue)
QMean score : 0.538
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