Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQSDAYLSLNAKTRFRDRTGNYHFASDKEAVEQYMIEHVEPNTMAFTSLIEKLDYLVSNNYYESDLLKQYNLEFICQIFEHAYAKKFAFLNFMGALKFYNAYALKTEDNRYYLEHYEDRVVMNALFLAAGDEKAAYDLVDDMLANRFQPATPTFLNAG-KKRRGEYISCYLLRIEDNMESISRAISTSLQLSKRGGGVALCLTNLREFGAPIKGIKNQATGIVPVMKLLEDSFSYANQLGQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLSLGLVIPDITFELAKANKDMALFSPYDIERVYGKPMSDISITEEYETLLA----NADIRKTFISARKLFQTIAELHFESGYPYILFEDTVNAKNPHKKE-GRIVMSNLCSEIAQVNTASQFSEDLTFTKVGHDVCCNLGSINIARAMDQAADFEKLIANSIRALDRVSRTSDLDSAPSIKKGNAANHAVGLGAMNLHGFLATNHIYYDSQEAIDFTDCFFYAMAYYAFKASNHLAKEKGTFEGFSESSYADGSYFYQYTEQNFEPKTQRVKNLLAEYGLTLPSQEDWRKLVQSIKEIGLANAHLLAVAPTGSISYLSSCTPSLQPVVSPVEVR--KEGALGRVYVPAYKIDADNYVYYKKGAYEV-GPEAIINIAAAAQKHIDQAISL------TLFMTDQATTRDLNKAYIQAFKQKCASIYYVRVRQDILEGSESYDDDMLDDFTSSDLEDCQACMI |
2R1R Chain:A ((203-737)) | ---------------------------------------------------------------------------------------------------------------------------------------------------FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFAD---QEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVND----ENGEIALCTLSAFNLG-AINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANE------------PLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQV-VPDYEHLHDAY----ELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYY----QNTRDG------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210431 for 4566 contacts (-46.1/contact) +
2D Compatibility (PS) -54996 + (NN) -19360 + (LL) 16216
1D Compatibility (HY) -28400 + (ID) 7650
Total energy: -304621.0 ( -66.72 by residue)
QMean score : 0.414
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