Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKSNYFKGQIDYAVVIPV-FFLLMIGLASIYVATMNDYPSNIYIAMFQQVSWIIMGCIIAFVVMLFSTEFLWKATPY-L-YALGLTLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQPSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLGLFGLVTLPVMILLMLQKDLGTALVFLAILSGLI-LLSGISWWIILPI-LSTIV-------LFIA-SFLMIFISPN-GKEWF---------------YNLGMDTYQINRLSAWIDPFSFADSIAYQQTQGMVSIGS-GGVTGKGFNILEL-SVPVRESDMIFTVIAENFGFIGSAIVLGLYLIIIYRMLRITI-ESNNQFYTFISTGFIMMIVFHVFENIGAAVGILPLTGIPL--PFISQGGSS-LLSNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI------------- |
| 3B7F Chain:A ((16-393)) | SAPESG------------PVMLLVATIKGAWFLASDPARRT-------WELRGPVFLGHTIHHIVQDP------REPERMLMAARTLG----PTVFRSDD-----GGGNWTEATRPPAFNKAPGRVVDHVFWLTPGHASEP--------------GTWYAGTSP--QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPA-------APDILYQQN--HCGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRD-----------------PRTVWVFPMDGSDVWPRVSPGG---KPAVYVTRDAGESWQRQD-RGLPTDQAWLTVKRQAMTADAHAPVGVYFGTT-GGEIWASADEGEHWQCIASHLPHIYAVQSARP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320505 for 2545 contacts (-125.9/contact) +
2D Compatibility (PS) -34694 + (NN) -4488 + (LL) 8152
1D Compatibility (HY) 8000 + (ID) 2950
Total energy: -346485.0 ( -136.14 by residue)
QMean score : 0.171
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