Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKILALDLDGTLFTTD-KKVSEENKVALKAAREKGIKVVITTGRPLKAIGNL--LEDLELVSDEDYSITFNGGLVQQNTGKILAKTAMTRQEVEDIHEELYQVGLPTDILSEGTVYSIANKGHHSQYHLANPLLEFIEVDDLEQVPKDVVYNK-IVSVIDATYLDQQIAKLPDRLKVDYEMFKSRDIILELMPKGVHKAVGLELLTKHLGLDSSQVMAMGDEANDLSMLEWAGLGVAMANGIPEAKAIAKATTICNNDESGVAEAIGKYILSEEN |
| 2RAV Chain:A ((3-258)) | ----KALFFDIAGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLI---DGYITMNGAYCFVGE-EVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNI-SVCQPNEM----VKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTC--EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVT-APIDEDGISKAMKHFGII--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93242 for 2278 contacts (-40.9/contact) +
2D Compatibility (PS) -27420 + (NN) -8939 + (LL) 1028
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -146173.0 ( -64.17 by residue)
QMean score : 0.500
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