Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFTNKFWLGVVSLFLAILLFLTATATSMNHQDNSKIAGASETYTHTLTDVPIDIKYDSDDYFISGYSYGADVYMSSVNRV-KLDSEINEDTRKFKVVADLTNMKPGT--HKVPLK------VVNLPSGVNATVSPTTITVTMGKKKTKEFPVYGHV---------NDKQIKAG-YAVDKMSVDVSKVKVTSD---ESIIDRIDHVAANIPDDKVLDDDFNKTVTLQAVTADGTVLA--SIIHPSKATLSVKVKKLTKTVPINLIPVGQFSDSISKINYKLSQEKAVISGTKEALEAISVINAEVDISDVTKNTEKKINLSANNVSVDPAQVTVQLTTTKK |
| 4KKS Chain:A ((53-282)) | ------------------------------------------------------------------------ADIFPDAVGKITSLRIKLGAYVQKGQIVATLDPSRPGSVYLKSPVRAPISGYILNITKKIGETVNPQSNIAVVGRIDTKQILTYVSEKYISNIKVGNDAIIEVGAYSNEKFKAKVSEISPILDSKSRTIEVYLTPIGSNL--DKLIIGMFSKIKLITKRFKDVIKISREAVVEREGKKFVFKVDLESKSVQMLPITVLFEIDNIVALSGEVEENDLIVVEGMSALSNGSLINLVDTKEGLSAESNI------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30027 for 1229 contacts (-24.4/contact) +
2D Compatibility (PS) -21744 + (NN) 6098 + (LL) 6072
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -53651.0 ( -43.65 by residue)
QMean score : 0.240
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