Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKTFWKDIYRSITTSKGRFSSILLLMMLGSFAFIGLKVSAPNMQRTAQNYLAHHHVMDITVFNSWGLDKHDQTVLESLKGSQVEFSYFVDTTPQQNSKSYRLYSNTKTISTFDLVKGRLPLNKSEIALSFQERKKYAIGDKINFKQDKNKLFSNTGPLTIVGFVNSTEIWSKTNLGSSQTGDGDLDSYGVLDKTAFHSPVYTMARVTFKDLRLINPFSISYKEKVAKYQEKVSRKLNIHNKIRYTKTKKESLRKIDEEEKSLLKAQKQINRLDNDSLAMPLSQRQAIQMKIKQDRLSLLKRTKELLKLRHNTQIMESPQIIVYNRTTFPGGQGYNTFDSSTNSTSKISNLFPIILYLVAALVTLTTMTRFVEEERTNAGILKALGYSDRQVIFKFIIYGFIAGTLGTTLGIIGGHYLLPRIISDIISKDLTIPNTQYHLFLNYSLLAFVFSLLSIVLPVFVITRRELKEKAAFLLLPKPPAKGSKIALEYINWIWKKLSFTQKVTARNIFRYKQRMIMTIFGVAGSVALLFSGLGIQSSLKQTVNEHFGRIMPYDILLTYNTNASPPKILELL-SKDSKIDKYQPIHLEN-LDESIPGQINKQSISLFITDKKQLLPFIYLQEATTNKSLHL--NNKGIIISKKLAQFYH-VNTGDFIHLSHSQTLPSRKLKITGVVNANV-----GHYIFMTKQYYRTIFKKE---TKDNAFLVKLTKHKIANNLAEKLLEINGVESLTQNALQLASVEAVVRSLDGSMTILVVVSLLLAIVILYNLTNINLAERKRELSTIKVLGFYNEEVTLYIYRETIILSTIGVILGTISGTYLHRQMMLLIGSDQILFGEKVSPTTFIIPISVVVIILISLCFIVNHQLKKLNMLDALKSVD |
3IS6 Chain:A ((45-199)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAIQEEIPGVELATRTTLYGTSKMILED-NKTYETKTLLAE-PAFLDMFGVELIA-GVRDSALRDNMTCLISESLARKMGGDVLGKRLRPAE--SKSDRAITIGGVFEDLPHNSSIQADMLLPITWMPAESLNNWIGNDRYIAYVRLRPGVSPESLDEALLEMQKRHQDMEVFRKAGVELHYSLTPFNRLRLEDPTLVNMLRIQ------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33898 for 976 contacts (-34.7/contact) +
2D Compatibility (PS) -14617 + (NN) 3835 + (LL) 52292
1D Compatibility (HY) -4000 + (ID) 850
Total energy: 2762.0 ( 2.83 by residue)
QMean score : 0.340
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