Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLIEPIRNGKRITDGAIALAMQVYILQNVFLD-DDILFPYYCDPKVEIGKFQNAVIETNQEYLKEHDIPVVRRDTGGGAVYVDSGAVNICYLM--KDHGQFGDFKRAYEPAIKALKTLGAS-SVEMRGRNDLIIDGK-KVSGAAMTIVNGRIYGGYSLLLDVDFDAMEKVLNPNRKKIESKGIKSVRSRVGDIRSHLSEDYRHITTDQFKDLMVCQLLHIDHIDQAKRYHLT----EKDWAAIDALADEKYKNWDWNYGNSPQYSYHRDARFPSGTYDFHLEIEKGI-ITNCRIYGDFFSSKDISDIENLLIGCPMKEELVLEKLSTVSLEDYFGQTSPEEIKAVLFP |
| 3A7U Chain:A ((19-281)) | -------------------LAVEDWIHDHMNLEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKL----VVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLK------------------KN----LMEKDPTLTCEVVINAVATEYATSHQIDN--HIHLINPTDETVFPGINSKAIE-LQTWEWIYGKTPKFSV--DTSFTVLHEQSHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGSKFSPIETTVLTSILHRTYPGDDELHSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89776 for 1682 contacts (-53.4/contact) +
2D Compatibility (PS) -25659 + (NN) -11791 + (LL) 3272
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -142354.0 ( -84.63 by residue)
QMean score : 0.376
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