Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK |
3UB0 Chain:B ((46-78)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAVLEKLLALIAFFLSKHNTCDLSDLIESYFENTTILQ------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2827 for 147 contacts (-19.2/contact) +
2D Compatibility (PS) -3646 + (NN) -2319 + (LL) 20316
1D Compatibility (HY) -2400 + (ID) 250
Total energy: 8874.0 ( 60.37 by residue)
QMean score : 0.754
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