Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDEFGVVSSRIGMRREAVPISDDMDIFSYIQNLPQKPYCVLIDECQFLSKKNVYDLARVVDDLDVPVMAFGLKNDFQNNLFEGSKHLLLLADKIDEIKTICQYCSKKATMVLRTENGKPVYEGDQIQIGGNETYIPVCRKHYFNPDI
1XBT Chain:A ((19-191))
-GQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR---------------ALPACLLRDVAQEALGVA----VIGIDEGQFFP--DIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVE-----VIGGADKYHSVCRLCYFK---
General information:
TITO was launched using:
RESULT:
Template:
1XBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96790 for 1289 contacts (-75.1/contact) +
2D Compatibility (PS) -16968 + (NN) -5665 + (LL) 1600
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -128723.0 ( -99.86 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1XBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XBT-query.scw
PDB file :
Tito_Scwrl_1XBT.pdb
: