Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYLDNAATTALTPSVIEKMTNVMTSNYGNPSSIHTFGRQANQLLRECRQIIAEYLNVNSREIIFTSGGTESNN----TAIKGYALANQLKGK---HIITSEIEHHSVLHTMTYLSERFGFDITYLKPN--HGQITAKDVQEALRDDTIMVSLMFANNETGDFLPIQEIGQLLRN----------HQAVFHVDAVQVFSKMELDPHSLGIDFLAASAHKFHGPKGVGILYC------APHHFDSLLHGGDQEEKRRASTENIIGIAGMSQALTDATTNTLKNWTHISQLRTTFLDAISDLDF----YLNN---GQDCLPHVLNIGFP-RQNNG-LLLTQLDLAGFAVSTGSACTAGTVE-PSHVLTSLYGANSPRLNESIRISFSELNTQEEILELAKTLRKIIGD |
| 3A9Z Chain:A ((20-425)) | -VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLY--PMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIR-DYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQT--LLASVGASCHSDHEDRPSPVLLSC-GIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170410 for 3169 contacts (-53.8/contact) +
2D Compatibility (PS) -38504 + (NN) -10299 + (LL) 100
1D Compatibility (HY) -20800 + (ID) 6150
Total energy: -246063.0 ( -77.65 by residue)
QMean score : 0.465
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