Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIIIMIIIAYLLGSIQTGLWIGKYFYQVNLRQHGSGNTGTTNTFRILGVKAGIVTLTIDILKGTLATLIPIILGITTVSPFFIGFFAIIGHTFPIFAQFKGGKAVATSAGVLLGFAPSFFLYLLVIFLLTLYLFSMISLSSITVAVVGILSVLIFPLVGFILTDYDWIFTTVVILMALTIIIRHQDNIKRIRKRQENLVPFGLNLSKQKNK |
2KWZ Chain:A ((15-33)) | -------------------------------------------------------ELIFTITKILLAILGPLMVLQAGITK----------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4415 for 64 contacts (-69.0/contact) +
2D Compatibility (PS) -1781 + (NN) 1023 + (LL) 16008
1D Compatibility (HY) -2400 + (ID) 350
Total energy: 8085.0 ( 126.33 by residue)
QMean score : -0.264
|
|
|