Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
2M20 Chain:A ((7-19))
---------TGLVGALLLLLVVALGIGLFIRRRHIVRKRTLRRLLQERELVEPLTPSG
General information:
TITO was launched using:
RESULT:
Template:
2M20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2182 for 46 contacts (-47.4/contact) +
2D Compatibility (PS) -1321 + (NN) 723 + (LL) 1144
1D Compatibility (HY) 0 + (ID) 50
Total energy: -1686.0 ( -36.65 by residue)
QMean score : 0.010
(partial model without unconserved sides chains):
PDB file :
Tito_2M20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M20-query.scw
PDB file :
Tito_Scwrl_2M20.pdb
: