Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRALKEDFFLTLTSLKNQFWVYIGTGILIQTLVAYLVKGILSFIFRRILILSNTPAVTKDNWTLLFNHPLALLLFILYIVILIGFIYTEFAIYTIAILKTEFSLSIKKWLTIFPKKIKSLLGPQLIWVSIYLLLTIPLANLGLRSSILEHLKIPDFISGELTKTVFGKIGYSTLLLLICYLNLRLIYFLPLTILTDYNAKEALLESWKLSRGKHQWRLLSKIILTSLFISVIGTVALAVVAGTSSFIDHSGNNFPLQATFYNLLKSILFAVTLLIKCLIISHLLADIKQNKSIVQQWRAWKGVQHKQKFKHIACVILALAIGTTALKNAIALALLQDNISIKKELIAHRGDTSHGVENSIEALKAAHKAKADYSEMDVIMTKDHKLVVIHD-------------DNLKRLSGMNKDVSKLTLDQVTKIPIH---QGRFASH------IPSFAEFMKTAQSLDQKIMI--ELKPY-------NQNLDIYADEFIKEFKELRLSTKHKVMSLNLTLIEKVEKKLPQLDTGYLIPLHWGTLQNHNVDFYGIEEFSYNDWIAY------------LAQEYNKQLYVWTINRDNLMIRYLQSPVNGIITDELNLFKVINKDIKNSPNYYQRALQLIDSEG |
| 3CH0 Chain:A ((10-269)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTEANEKNFNLYAMNYADIKEIDVGMKTHPRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETK-GTLKKQ------LEKLSFTPAVYSPDVTLVSKKDIDAAHKLGMRVIPWTVNTKEEIETLISLGVDGIITDYPDLFFEK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64397 for 1717 contacts (-37.5/contact) +
2D Compatibility (PS) -23984 + (NN) -8145 + (LL) 34420
1D Compatibility (HY) -16000 + (ID) 2850
Total energy: -80956.0 ( -47.15 by residue)
QMean score : 0.407
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