Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLVLRKNYEQYEF---LDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQ-------------YTNGLVGK------TRIVQALSQGK--AYADVR---GVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIV---------KQVTEAKIGTAEVSGMITRSVDQDNVSPV----GSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALN--EQYDQKQNFFLQIAGLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLLGAINP---DTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 1HPU Chain:A ((43-505)) | -----------------------------------------------------------------------------KEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQ--------------------QEKWAKFPLLSANIYQKSTGERLF--KPWAL----FKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ---ELQ-QTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIG--ETNGRLEG--DRDKVRFVQTNMGRLILAAQMDRT-----GADFAVMSGGGIRDSIEA---GDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGK----------LNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKP--GYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112801 for 3287 contacts (-34.3/contact) +
2D Compatibility (PS) -44968 + (NN) -16790 + (LL) 13512
1D Compatibility (HY) -19600 + (ID) 6100
Total energy: -186747.0 ( -56.81 by residue)
QMean score : 0.359
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