Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAKGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKVNHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLMENSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSENVITESQAFSFHVKGKLENTYDIKLIGKFNQENAIAAGLACL---RLGVSIEDIKNGIAQTTVPGRMEVLTQTNGAKIFVDYAHNG-------DSLKKLLAVVEEHQKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
| 3PYZ Chain:A ((274-357)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATALAVLHYSELPLSDEAIRQGLQAASLPGRFQVVSEQ--PLLILDVAHNPHAARYLVNRLAQVI-------QGKVRAVVGMLSDKDIAGTLACLSERVDEWYCAPLEGPRGASAGQLAEHLVSARQFSDVETAWRQAMQDADTQDVVIVCGSFHTVAHVMAALHL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11812 for 258 contacts (-45.8/contact) +
2D Compatibility (PS) -6763 + (NN) -630 + (LL) 23860
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -3645.0 ( -14.13 by residue)
QMean score : 0.351
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