Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVML-----VIAIIQGLAIAISFQYHNGFSLTKLLLATMILVT---GAYIISWIGNLNAEYGFG-GMTILVVVG----MLVGQFNNIPLIFE----LFQDGYQLAIILFLLWTLVAMYLMITFERSEYRIPVMRTSIHN-------RLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSY--NDYFSLSSIQG----VVIYMILMLVLSVAFTF-----VNIDPTKISEAMRESGDFIPNYRPGKET-----QSYLSKICYLFGTFSGF------FMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 2YXR Chain:A ((72-409)) | -------------------------------------------------------------------TLGIGPIVTAGIIMQLLV----GSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPV-ILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGG-------GTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181044 for 1944 contacts (-93.1/contact) +
2D Compatibility (PS) -30730 + (NN) -18084 + (LL) 7788
1D Compatibility (HY) -30800 + (ID) 3700
Total energy: -256570.0 ( -131.98 by residue)
QMean score : 0.115
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