Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVVLVTGCASGIGYAQAQYFLKQGYQVYGVDKSDKPN------LNGNFNFIKLDLS------SDLSPLFTMVPTVDILCNTAGILDAYKPLLEVSDEELEHLFDINFFVTVRLTRHYLRRMVEKKSGIIINMCSIASFIAGGGGAAYTSSKHALAGFTRQLALDYAKDCIQIFGIAPGAVQTAMTA--SDFEPGGLAEWVASETPIGRWTKPSEVAELTGFLASGKARSMQGEIVKIDGGWSLK
1Q7C Chain:A ((6-241))
--KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAG----ILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV
General information:
TITO was launched using:
RESULT:
Template:
1Q7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148822 for 1861 contacts (-80.0/contact) +
2D Compatibility (PS) -23805 + (NN) -6420 + (LL) 984
1D Compatibility (HY) -12000 + (ID) 3750
Total energy: -193813.0 ( -104.14 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7C-query.scw
PDB file :
Tito_Scwrl_1Q7C.pdb
: