Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIP-ISIIVPAYNESTTIVS-SIDSLLHLDYEA--YEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIVKENGGKGDALNMGINAANYDYFLCLDADSMLQVDSLSQISKSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVGGYDTQTLGEDMELVMKLHFFCRNNNIPYRICYETDAVCWSQAPTNLGDLRKQRRR |
| 4HG6 Chain:A ((96-351)) | ----------ASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELA-QKAQERRREL--QQLC-----RELGVVYSTRERNEHAKAGN-MSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDR-----CPPENEMFYGKIHRG----LDRW-GGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96865 for 1785 contacts (-54.3/contact) +
2D Compatibility (PS) -25725 + (NN) -221 + (LL) 3684
1D Compatibility (HY) -9200 + (ID) 2800
Total energy: -131127.0 ( -73.46 by residue)
QMean score : 0.294
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