Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDKSMKLEHVAYDIRGPVLEEADRMRANGEKILRLNTGNPAAFGFEAPD---EVIRDLITNARESEGYSDSKGIFSARKAVMQYYQLQN-IHVDMDDIYIVNGVSEGISMSMQALLDNDDEVLVPMPDYPLWTACVSLAGGNAVHYICDEEANWYPDIDDIKSKITSKTKAIVLINPNNPTGAVYPREILQEIVDIARQNDLIIFSDEVYDRLVMDGMEHIPIASIAEDIFTVTLSGLSKSHRICGFRVGWMVLSGPRQHVKGYIEGLNMLANMRLCSNVLAQQVIQTSLGGQQSIDSMLLPGGRIY-EQRNYIHKAINEIPGLSAVKPNAGLYLFPKIDTDMYRIDNDEEFVLNFLKQEKVLLTHGRGFNMNTADHFRIVYLPRVDELTELQEKMARFLSQYKR |
| 1GC4 Chain:A ((26-382)) | ---------------------------LRRQGVDLVALTAGEP---DFDTPEHVKEAARRALAQGKTK--YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAPE-HTLTVNGAAKAFAMTGWRIGYAC--GPKEVIKAMA---SVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----MDTSPIAPDEVRAAERLLEAGVAVVPGTDF--AAFGHVRLSYATSEENLRKALERFARVL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223672 for 3121 contacts (-71.7/contact) +
2D Compatibility (PS) -38494 + (NN) -17303 + (LL) 3660
1D Compatibility (HY) -17200 + (ID) 5100
Total energy: -298109.0 ( -95.52 by residue)
QMean score : 0.512
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