Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEV----NALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAIL---SLKPL-KPEDILVSAVDD------ETDYHTRRALVAETTL--NDKVVTVVSLHLSWF-EKGFAEEWKRLETTLLE--VETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHV-FGDHTIMADIDGWEGNKKALKVDHIFTSEDLSISSSQVVFEGGEAPVVSDHYGLEITMDF |
| 3G6S Chain:A ((3-259)) | DVRWATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQFQDLR-------------------------AGLP--EYDGIGV-GRD-DG-KTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFA-RI-PAEDCEKIDFIFVTPQVLVKSCEIPA-EVPEALLSDHNPQLADLEL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31552 for 1846 contacts (-17.1/contact) +
2D Compatibility (PS) -23805 + (NN) 4712 + (LL) 1820
1D Compatibility (HY) 6800 + (ID) 900
Total energy: -42925.0 ( -23.25 by residue)
QMean score : 0.139
|
|
|