Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNKVQERRERKIKEAIKAKNWDEVTRL-LQQEQSNAERRD--RYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQ-GSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR |
1W7B Chain:A ((36-152)) | ------ERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMK----GLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27938 for 716 contacts (39.0/contact) +
2D Compatibility (PS) -12288 + (NN) -5001 + (LL) 932
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: 4831.0 ( 6.75 by residue)
QMean score : 0.245
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