Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYHFSAV-AITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTERGH---LPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
1G6N Chain:A ((29-205))
----------------------------------------TLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQ-PDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVY----------
General information:
TITO was launched using:
RESULT:
Template:
1G6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85584 for 1178 contacts (-72.7/contact) +
2D Compatibility (PS) -18596 + (NN) -8147 + (LL) 4212
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -120015.0 ( -101.88 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1G6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6N-query.scw
PDB file :
Tito_Scwrl_1G6N.pdb
: