Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNLRNRLSGVNGKNKRVKEKEQKIWSEIGMIAGAFALLDVIIRGIMFEFPFKEWAASLVFLFIIILYYCIRAAASGMLMPRIDT-KEELQKRVKQQRIESIAVAFAVVVLTMYDRGIPHTFFAWLKMILLFIVCGGVLFLLRYVIVKLAYRRAVKEEIKKKSSFLFGKRGKRSQFRAAFFIGTLICIHSAKLF
4PDI Chain:A ((3-42))-------------------------------------------------------------------------------LPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQ------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 18 -3707 -205.94 -102.97
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.49

3D Compatibility (PKB) : -205.94
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.260

(partial model without unconserved sides chains):
PDB file : Tito_4PDI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PDI-query.scw
PDB file : Tito_Scwrl_4PDI.pdb: