Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKKQDTRRFKEIKPKIMYYGTSTFLLTTLNEDGTTNISPMSSSWALG--H-YIILGVGLGGKAIDNLERHKECVINLPGPDLWENVERISSYSGKKSIPPLKKQIGFTYKKEKYEAAGLTPLQSKTVSPTRIKECPIQIEAEVKHIRLPEYES-SFAIVETQALHFHAEESIILDEN-HINPSKWSPLIYNFR-HYFGLGREVGKTFRSET
4Z85 Chain:A ((20-199))-----------------GSVGPRPIALVTSLNSEGLCNAAPYSAFNYMGEDPPLFVIAVDH-KDTLKNIIEREQFVVNMVDERIAERMVLCGSDF-----------------ISEAEAVGFDLTPSTTIDVPRITDAPIAWECKLYKIIDF---SKQRSMVFGEIVAMYFREELIDEEKLRVRVDLFQPYGRLGGPNYCRTTDR---------


General information:
TITO was launched using:
RESULT:

Template: 4Z85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 831 -101220 -121.81 -632.63
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -121.81
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4Z85.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z85-query.scw
PDB file : Tito_Scwrl_4Z85.pdb: