Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGYPKEGETIQIHSYKHNGLIHRIWNETTILKSTEMCVIGANDRTMVTESDGRTWITREPAICYFHARQWFNVIGMLREDGVHYYCNISSPFAYDGEAIKYIDYDLDVKVFPDMTYNILDEDEYDDHRKAMNYPKEIDSILRDYLNTLLHWIHQRQGPFAPEFVDMWYERYLRYTK
3UJD Chain:A ((181-235))-------------------------------------------------------------------------------------------------------------------YTLITVEEYADILTACNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKLFSEK------


General information:
TITO was launched using:
RESULT:

Template: 3UJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 48 1596 33.25 29.02
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : 33.25
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.117

(partial model without unconserved sides chains):
PDB file : Tito_3UJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UJD-query.scw
PDB file : Tito_Scwrl_3UJD.pdb: