Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAALPAPEKLLRSDFPVLWPVGTRWADNDMFGHLNNAVYYQLFDTAINAWINTSTGVDPLAMPVLG---IVAESGCRYFSELRFPESLMVGLAVTRLGRSSVTYRLGVFKEPDDAGVITALGHWVHVYVDRTSRRPVPIPEAIRSLLSTACVSG
2EGI Chain:A ((2-127))
---------------PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLR-SKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKE----DIAVAKANTKHCMV--K---IVSIPKEVLEVLK------
General information:
TITO was launched using:
RESULT:
Template:
2EGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90107 for 820 contacts (-109.9/contact) +
2D Compatibility (PS) -13033 + (NN) -4357 + (LL) 1528
1D Compatibility (HY) -10400 + (ID) 1400
Total energy: -117769.0 ( -143.62 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_2EGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EGI-query.scw
PDB file :
Tito_Scwrl_2EGI.pdb
: