Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNVILTTIGVRFGTGR |
| 3PC4 Chain:A ((224-256)) | -----------------------------------------------------------------------------------------------------------MIVVSAGTAGTISGIG-RKIKEQVPSCQIVGVDP---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23586 for 168 contacts (-140.4/contact) +
2D Compatibility (PS) -3676 + (NN) -1633 + (LL) 18816
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -14579.0 ( -86.78 by residue)
QMean score : 0.219
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