Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFVRASGVEIGKVKALHLVDGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGKGANDLLPPGGLIPLSRTSPALDLDALIGGFKPVFRALDPAKVNNIANALITVFQGQGGTINDILDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETVNNLENLITGLRNHSDQLAGGLAHISNGAGTVADLLAENRTLVR-KAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWNGFQAGGPVRTVKLFSQPTGRCTPQ |
4ABX Chain:A ((261-340)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGEAVRALNA--------GAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSA--ADPEALDRVEARLSALSKLKNKYGPTLEDVVEF------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ABX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -255 for 363 contacts (-0.7/contact) +
2D Compatibility (PS) -8001 + (NN) -3940 + (LL) 16336
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: 1190.0 ( 3.28 by residue)
QMean score : 0.173
|
|
|