Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPVSLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLGEAHDAAVRTLAAKTGD----RFAGLETVSNDAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKVDPNVAPIVFHRSVLRRLGV
1RZ0 Chain:A ((6-151))
-----------FRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEEL------GGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQ-DPLLFFSGKYHQL--
General information:
TITO was launched using:
RESULT:
Template:
1RZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108271 for 1058 contacts (-102.3/contact) +
2D Compatibility (PS) -15569 + (NN) -4983 + (LL) 400
1D Compatibility (HY) -11200 + (ID) 1900
Total energy: -141523.0 ( -133.76 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1RZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RZ0-query.scw
PDB file :
Tito_Scwrl_1RZ0.pdb
: