Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVCHTIADVVDRAKAERSENTLRKDFTPSELLAAGRRIAELERPKAKQRQREGGDHGRQARYSGLGSMEPKPESERDAHKADTAISEALGISRGHYQRLKRIDNATRSEAGYRDGLNGWSG
4GT3 Chain:A ((129-160))
-HICYFLYQILRGLKYIHSANVLHRDLKPSNLL-----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GT3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1245 for 127 contacts (-9.8/contact) +
2D Compatibility (PS) -3322 + (NN) -620 + (LL) 4076
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -5261.0 ( -41.43 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_4GT3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GT3-query.scw
PDB file :
Tito_Scwrl_4GT3.pdb
: