Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANPFVKAWKYLMALFSSKIDEHADPKVQIQQAIEEAQRTHQALTQQAAQVIGNQRQLEMRLNRQLADIEKLQVNVRQALTLADQATAAGDAAKATEYNNAAEAFAAQLVTAEQSVEDLKTLHDQALSAAAQAKKAVERNAMVLQQKIAERTKLLSQLEQAKMQEQVSASLRSMSELAAPGNTPSLDEVRDKIERRYA---NAIGSAELAESSVQG----RMLEVEQAG---IQMAGHSRLEQIRAS--MRGEALPAGGTTATPRPATETSGGAIAEQPYGQ |
| 2YQS Chain:A ((43-164)) | ---------------------------------------------------------------------------------------------------------------------------------------------------IEEPAKLISTVEQAIQFS-------NFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKP---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14051 for 417 contacts (33.7/contact) +
2D Compatibility (PS) -10416 + (NN) -1637 + (LL) 15864
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: 11212.0 ( 26.89 by residue)
QMean score : 0.079
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