Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDGKRAVTSAVLVVLGACLALWLSGCSSPKPDAEEQGVPVSPTASDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLA--AKGVCTYND-EQGVPFRVQGDNISVKLF-DDWSNLGSISELS-TSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPASSVKMLDPG--AKSARPATVWIAQDGSHHLVRASIDL-GSGSIQLTQSKWNEPVNVD |
| 3MH9 Chain:C ((36-231)) | --------------------------------------------GPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPG-LSLKTLSGDLTTNPTAATGNWKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73988 for 1423 contacts (-52.0/contact) +
2D Compatibility (PS) -20732 + (NN) -9860 + (LL) 2444
1D Compatibility (HY) -8400 + (ID) 2800
Total energy: -113336.0 ( -79.65 by residue)
QMean score : 0.520
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