Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIPGPAGEIPARHYRPSGGGATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARDKARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNG---FLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLAESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGT-AVDLRYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
3ZWQ Chain:A ((39-309)) | -----------------------------------------------------------------------------------------------ILVKMANEPIH-RVEDITIPGRGGPIRARVYRPRDGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKFPAAVEDAYDAAKWVADN-YDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDR----GESFVKYQVLIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQ-DALSPYASPIFAD-LSNLPPALVITAEYDPLRDEGELYAHLLKTRGVRAVAVRYNG-VIHGFVNFYPILEEGREAVSQIAASIKS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139042 for 2433 contacts (-57.1/contact) +
2D Compatibility (PS) -28807 + (NN) -18753 + (LL) 7548
1D Compatibility (HY) -20800 + (ID) 5750
Total energy: -205604.0 ( -84.51 by residue)
QMean score : 0.499
|
|
|