Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSEQSASIEHVDVLIVGAGISGTGAAYYLKTMQPAKTFAIVEA-----------RYPAIRSDSDLHTFSYEF-----KPWQHEKATASADAIMVHRGRSLAGGDRTLRHRRTRHHELRMVIIGSGATAVTLVPAMAQTAGAVTMPK
4D04 Chain:A ((15-97))
---------EEVDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGDVGGVWYWNRYPGARDDIESIEYCYSFSEEVLQEWNWTERYASQPEIL-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4D04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21211 for 334 contacts (-63.5/contact) +
2D Compatibility (PS) -6577 + (NN) 3504 + (LL) 4556
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -27428.0 ( -82.12 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_4D04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D04-query.scw
PDB file :
Tito_Scwrl_4D04.pdb
: