Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGI-VPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVL-VTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT
1VRG Chain:A ((46-262))--------------KLTAWERLELLLDPGTFVEI-DKFVEHRNTYFGLDKVKLPR--DGVITGVGEINGRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLAL---KMGIPV--IGINDSGGARIQEGVDALAGYGEIFLRNTLASGVVPQITVIAGP--CAGGAVYSPALTDFIVMVDQTARMFITGPNVIKAVTG-EEISQED-------LGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLPSNNAEEPPVEDPDTSLETPEDILDILPDNPNKGYDVRDVIKR


General information:
TITO was launched using:
RESULT:

Template: 1VRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93009 for 1856 contacts (-50.1/contact) +
2D Compatibility (PS) -24189 + (NN) -13536 + (LL) 2808
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -141726.0 ( -76.36 by residue)
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_1VRG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VRG-query.scw
PDB file : Tito_Scwrl_1VRG.pdb: