Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLA---AHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDRERLECFE
3D0S Chain:A ((6-222))
--------EILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPR-TSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERLARRA
General information:
TITO was launched using:
RESULT:
Template:
3D0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135970 for 1553 contacts (-87.6/contact) +
2D Compatibility (PS) -22328 + (NN) -7578 + (LL) 1112
1D Compatibility (HY) -13200 + (ID) 2850
Total energy: -180814.0 ( -116.43 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3D0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D0S-query.scw
PDB file :
Tito_Scwrl_3D0S.pdb
: