Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLKPLLQQGITPDRERLSDVQVRGSVFILD-GVEYDFGRMQPGGYLPPEAYHDTPFIDIRFVDGDRLYLHYIHQVTSEVMMQFPREIESIPVDQDGKVEVAFSYEHPMG
3C0F Chain:B ((3-87))
--------IMDEIVNLQKEVSLEEAERYANIASYGDGILLSVHDSTGYRAPEVYCC----------GEKPWEVYACN----------RGANLISVNQ---FEFYFRIEVE-G
General information:
TITO was launched using:
RESULT:
Template:
3C0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17447 for 509 contacts (-34.3/contact) +
2D Compatibility (PS) -8340 + (NN) -7196 + (LL) 2688
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -32845.0 ( -64.53 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_3C0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C0F-query.scw
PDB file :
Tito_Scwrl_3C0F.pdb
: