Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS
1RNL Chain:A ((8-207))
---ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLA-ASL----------QLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV------------
General information:
TITO was launched using:
RESULT:
Template:
1RNL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123520 for 1483 contacts (-83.3/contact) +
2D Compatibility (PS) -20510 + (NN) -7315 + (LL) 1796
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -166549.0 ( -112.31 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1RNL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RNL-query.scw
PDB file :
Tito_Scwrl_1RNL.pdb
: