Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLFVCLGNICRSPTAEGVFRRKVEEAGLASRIH-VDSAGTAGWHVGKAPDQRTRLAAQRRGYDLSALRGRQVGIEDFSRHDLILAMDLSNLADLETLRAGRGAAELDLF---LRRYGSERDEVPDPYYGGEEGFEQVLDLIEHACDRLLIEAKGRL
1D1P Chain:A ((7-156))
ISVAFICLGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINH-KGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFL-------
General information:
TITO was launched using:
RESULT:
Template:
1D1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68401 for 1198 contacts (-57.1/contact) +
2D Compatibility (PS) -15537 + (NN) -3848 + (LL) 796
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -101190.0 ( -84.47 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_1D1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1P-query.scw
PDB file :
Tito_Scwrl_1D1P.pdb
: